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About

MANIFESTO

We at Oak Bioinformatics aim to better people’s life with the power of genomics and bioinformatics.

 

We aim to positively affect the everyday life of everyone.

 

Not just researchers and hospitals, but everyone.

 

Not just once in a lifetime, but every day.

 

Not just big institutions, but everybody’s phones and browsers.

 

We aim to permeate everyone’s everyday with the power of genomics and bioinformatics for health and happiness.

 

Ryangguk Kim, PhD
CEO

WHO WE ARE

Ryangguk Kim

CEO
Ryangguk Kim obtained BS, MS, and PhD in biological sciences and biotechnology at the Seoul National University. He went through post-doctoral training in bioinformatics and computational biology at The Georgia Institute of Technology, The University at Buffalo, and The University of North Carolina at Charlotte. Before founding Oak Bioinformatics, LLC, Ryangguk worked as a bioinformatics scientist at In Silico Solutions, LLC and Kiromic Biopharma, Inc.

OUR TECHNOLOGY

WEB

Full-stack web server development with front-end and back-end frameworks

NGS

Processing, analysis, and handling of next-generation sequencing data

Simulation

Molecular simulation methods including protein-ligand (drug) docking and protein folding

CLOUD

Amazon Web Services, Microsoft Azure, and Google Cloud Platform

CLUSTER COMPUTING

Established technologies for cluster computing including PBS and Slurm

VISUALIZATION

DNA, RNA, and protein visualization on GUI and browser

BIG DATA

Apache Spark, Dask, Pandas, Hadoop, and other leading tools

DATABASE

Major database architectures including MySQL, PostgreSQL, SQLite, and Google Big Query

VERSION CONTROL

Best practices for leading version control systems including Git and GitHub

CONTAINERIZATION

Proficiency with leading containerization technology including Docker and Kubernetes

LANGUAGE

Python, Java, Javascript, R, C, C++, Rust, Matlab, and other performant programming languages

SCIENCE

Deep knowledge on biological sciences including genomics, bioinformatics, and molecular biology

OUR PROJECTS